Publications

Highlights

Anyone interested in how to map and model brain networks can check out Alex’s textbook, Fundamentals of Brain Network Analysis, co-authored with Andrew Zalesky and Edward Bullmore.

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Selected publications

Cao, T., Pang, J. C., Segal, A., Chen, Y. -C., Aquino, K. M., Breakspear, M., Fornito, A. (2024). Mode-based morphometry: A multiscale approach to mapping human neuroanatomy. Human Brain Mapping.
https://onlinelibrary.wiley.com/doi/10.1002/hbm.26640

Arnatkeviciute, A., Markello, R., Fulcher, B. D., Misic, B., Fornito, A. (2023). Towards best practices for imaging transcriptomics. Biological Psychiatry, 93(5): 391-404.
https://www.biologicalpsychiatryjournal.com/article/S0006-3223(22)01710-3/pdf

Chopra, S., Segal, A., Oldham, S., Holmes, A., Sabaroedin, K., Orchard, E. R., Francey, S. M., O’Donoghue, B., Cropley, V., Nelson, B., Graham, J., Baldwin, L., Tiego, J., Yuen, H. P., Allott, K., Alvarez-Jimenez, M., Harrigan, S., Fulcher, B. D., Aquino, K., Pantelis, C., Wood, S. J., Bellgrove, M., McGorry, P., Fornito, A. (2023). Network-based spreading of grey matter changes across different stages of psychosis. JAMA Psychiatry, 80: 1246-1257.
https://jamanetwork.com/journals/jamapsychiatry/article-abstract/2809719

Pang, J. C.*, Aquino, K. M.*, Oldehinkel, M., Robinson, P. A., Fulcher, B. D., Breakspear, M., Fornito, A. (2023). Geometric constraints on human brain function. Nature, 618, 566-574.
* Equal author contributions
https://www.nature.com/articles/s41586-023-06098-1

Sabaroedin, K., Tiego, J., Fornito, A. (2023). Circuit-based approaches to understanding corticostriatothalamic dysfunction across the psychosis continuum. Biological Psychiatry, 93: 113-124.
https://www.biologicalpsychiatryjournal.com/article/S0006-3223(22)01445-7/fulltext

Segal, A., Parkes, L., Aquino, K., Kia, S. M., Wolfers, T., Franke, B., Hoogman, M., Beckmann, C. F., Westlye, L. T., Andreassen, O. A., Zalesky, A., Harrison, B. J. , Davey, C., Soriano-Mas, C., Cardoner, N., Tiego, J., Yucel, M., Braganza, L., Suo, C., Berk, M., Cotton, S., Bellgrove, M. A., Marquand, A.*, Fornito, A.* (2023). Regional, circuit, and network heterogeneity of brain abnormalities in psychiatric disorders. Nature Neuroscience, 26, 1613-1629.
* Equal author contributions
https://www.nature.com/articles/s41593-023-01404-6

Tiego, J., Martin, E., DeYoung, C., Hagan, K., Cooper, S. E., Pasion, R., Satchell, L., Shackman, A. J., Bellgrove, M. A., Fornito, A. and the HiTOP Neurobiological Foundations Work Group. (2023). Precision behavioral phenotyping as a strategy for uncovering the biological correlates of psychopathology. Nature Mental Health, 1: 304-315.

https://www.nature.com/articles/s44220-023-00057-5

Sabaroedin, K., Razi, A., Chopra, S., Tran, N., Pozaruk, A., Chen, Z., Finlay, A., Nelson, B., Allott, K., Alvarez-Jimenez, M., Graham, J., Yuen, H. P., Harrigan S., Cropley, V., Sharma, S., Saluja, B., Williams, R., Pantelis, C., Wood, S. J., O’Donoghue, B., Francey, S., McGorry, P., Aquino, K., Fornito, A. (2023). Frontostriatothalamic effective connectivity and dopaminergic function in the psychosis continuum. Brain, 146: 372-386.
https://academic.oup.com/brain/article/146/1/372/6517518

Oldham, S., Fulcher, B. D., Aquino, K., Arnatkeviciute, A., Paquola, C., Shishegar, R., Fornito, A. (2022). Modelling spatial, developmental, physiological, and topological constraints on human brain connectivity. Science Advances, 8: eabm6127.
https://www.science.org/doi/10.1126/sciadv.abm6127

Deco, G*., Kringelbach, M*., Arnatkeviciute, A., Oldham, S., Sabaroedin, K., Rogasch, N. R., Aquno, K. M.#, Fornito, A.# (2021). Dynamical consequences of regional heterogeneity in the brain’s transcriptional landscape. Science Advances, 7: eabf4752.
*# Equal author contributions
https://advances.sciencemag.org/content/7/29/eabf4752

Chopra, S., Francey, S. M., O’Donoghue, B., Sabaroedin, K., Arnatkeviciute, A., Cropley, V., Nelson, B., Graham, J., Baldwin, L., Tahtalian, S., Yuen, H. P., Allott, K., Alvarez-Jimenez, M., Harrigan, S. L., Pantelis, C., Wood, S. J., McGorry, P., Fornito, A. (2021). Longitudinal changes in functional connectivity in antipsychotic-treated and antipsychotic-naïve first episode psychosis patients with low-risk of self-harm or aggression: A secondary analysis of a randomized clinical trial. JAMA Psychiatry, e211422.
https://jamanetwork.com/journals/jamapsychiatry/fullarticle/2781373

Arnatkeviciute, A., Fulcher, B. D., Oldham, S., Tiego, J., Paquola, C., Gerring, Z., Aquino, K., Hawi, Z., Johnson, B., Ball, G., Klein, M., Deco, G., Franke, B., Bellgrove, M., Fornito, A. (2021). Genetic influences on hub connectivity of the human connectome. Nature Communications, 12:4237.
https://www.nature.com/articles/s41467-021-24306-2

Fulcher, B. D., Arnatkeviciute, A., Fornito, A. (2021). Overcoming false-positive gene-category enrichment in the analysis of spatially resolved transcriptomic brain atlas data. Nature Communications, 12:2669.

https://www.nature.com/articles/s41467-021-22862-1

Oldham, S., Arnatkeviciute, A., Smith, R. E., Jeggan, T., Bellgrove, M. A., Fornito, A. (2020). The efficacy of different preprocessing steps in reducing motion-related confounds in diffusion MRI connectomics. NeuroImage, 117252.
https://www.sciencedirect.com/science/article/pii/S1053811920307382

Arnatkeviciute, A., Fulcher, B., Fornito, A. (2019). A practical guide to linking brain-wide gene expression and neuroimaging data. NeuroImage, 189: 353-367.
https://www.sciencedirect.com/science/article/abs/pii/S1053811919300114

Fornito, A., Arnatkevicuite, A., Fulcher, B. D. (2019). Bridging the gap between the brain’s transcriptome and connectome. Trends in Cognitive Sciences, 23(1): 34-50.
https://www.sciencedirect.com/science/article/abs/pii/S1364661318302535

Parkes, L., Fulcher, B., Yücel, M., Fornito, A. (2018). An evaluation of the efficacy, reliability, and sensitivity of motion correction strategies for resting-state functional MRI. NeuroImage, 171: 415-436.
https://www.sciencedirect.com/science/article/pii/S1053811917310972

Fulcher, B. D., Fornito, A. (2016). A transcriptional signature of hub connectivity in the mouse connectome. Proceedings of the National Academy of Sciences, USA, 113(5): 1435-1440.
https://www.pnas.org/content/early/2016/01/14/1513302113

Fornito, A., Zalesky, A., Breakspear, M. J. (2015). The connectomics of brain disorders. Nature Reviews Neuroscience, 16: 159-172.
https://www.nature.com/articles/nrn3901

Fornito, A., Harrison, B. J., Goodby, E., Dean, A., Ooi, C., Nathan, P. J., Lennox, B. R., Jones, P., Suckling, J., Bullmore, E. T. (2013). Functional dysconnectivity of cortico-striatal circuitry as a risk phenotype for psychosis. JAMA Psychiatry, 70:1143-1151.
https://jamanetwork.com/journals/jamapsychiatry/fullarticle/1733253

Additional publications

Lists of NSB preprints can be found here:

A list of NSB Lab publications can be found on PubMed