Resources

We are passionate advocates of open science, ensuring that we publicly release all relevant code and data (when appropriate and when user agreement is satisfied) to reproduce the findings in each of our papers. We also create general resources that could be useful to other people.

Here are some highlights:

• GeometricEigenModeModel – Toolbox for modelling structural connectivity across species. Code Paper
• BrainEigenmodes – Toolbox for extracting and applying geometric eigenmodes to model brain organisation and dynamics. Code Paper
• evolution-brain-tuning – Toolbox for modelling changes in the tuning of brain dynamics across different species. Code Paper
• BrainPalimpsest – Toolbox for deconvolving BOLD-fMRI to simultaneously yield spatiotemporal images of underlying neural activity, neuroglial drive, cerebral blood flow (CBF), cerebral blood volume (CBV), deoxygenated hemoglobin (dHb) concentration, and response modes. Code Paper
• utils_lib – Repository of Matlab utility functions for calculating, visualising, analysing, and modelling various neuroscience-related concepts. Code